miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|58329774|gb|AJ766109.1|AJ766109 GGGCCATTGTGGGCACATGGAAACCCACCAAGAATGACACATTGGCCAACCGGTTTCCAGGGTTCGGCACCACCATGAAT
ATCCTTTATGGTGAACGCGTGTGCGGTCAAGGTGACGTGGATGACATGAACACAATTGTCACTCATTATTTATATTATCT
TGACTTGATGGGTGTGGGCCGTGAGGAAGCTGGGCCCCACGAGGTGCTGACGTGTGCACAACAAAAACCGTTCAATCCGT
CAGCTCCGACCCAAGCGTCTTCAAGGTAAGCGTGTTTGTTTATCGTTCTTGATTCTCTCCATGAATAAATGGTGGTTGCG
TGGAAATATGTAAGTTTGTGGAATCGTCTGTTAATAGATTTGAAATTTGATTCGTTGTTAAAAAAAAAAAAAAAAAA




Most similar to sp|Q9MA41|CTL1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9MA41|CTL1_ARATH Chitinase-like protein 1 OS=Arabidopsis
           thaliana GN=CTL1 PE=1 SV=1
          Length = 321

 Score =  134 bits (336), Expect = 2e-31
 Identities = 57/85 (67%), Positives = 71/85 (83%)
 Frame = +3

Query: 9   VGTWKPTKNDTLANRFPGFGTTMNILYGERVCGQGDVDDMNTIVTHYLYYLDLMGVGREE 188
           VG WKPTKNDTL+ R P FG+TMN+LYGE  CGQG +D MN I++HYLY+LDLMG+GRE+
Sbjct: 236 VGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGRED 295

Query: 189 AGPHEVLTCAQQKPFNPSAPTQASS 263
           AGP++ L+CA+QKPFNPS    +SS
Sbjct: 296 AGPNDELSCAEQKPFNPSTVPSSSS 320